#Unlocking fermentation secrets open door to new biofuels"This work advances our fundamental understanding of the complex, system-level process of clostridial acetone-butanol-ethanol (ABE) fermentation, "explained Ting Lu, an assistant professor of bioengineering at Illinois."Simultaneously, it provides a powerful tool for guiding strain design and protocol optimization, therefore facilitating the development of next-generation biofuels.""Microbial metabolism is a means by which a microbe uses nutrients and generates energy to live and reproduce. It typically involves complex biochemical processes implemented through the orchestration of metabolic reactions and gene regulation, as well as their interactions with environmental cues. One canonical example is the ABE fermentation by Clostridium acetobutylicum, during which cells convert carbon sources to organic acids that are reassimilated later to produce solvents as a strategy for cellular survival.""Clostridium is very much like a factory during fermentation which converts carbon sources into renewable, advanced biofuels that can be used directly to fuel your cars,"added Lu, who is affiliated also with the Department of physics and Carl R. Woese Institute for Genomic Biology at Illinois."The complexity and systems nature of the process have been largely underappreciated, rendering challenges in understanding and optimizing solvent (ABE) production.""Array"To our knowledge, this framework elucidates, for the first time, the complex system-level orchestration of metabolic reactions, gene regulation, and environmental cues during clostridial ABE fermentation,"Lu said.""It also provides a quantitative tool for generating new hypotheses and for guiding strain design and protocol optimization--invaluable for the development of efficient metabolic engineering strategies, expediting the development of advanced biofuels. More broadly, by using the ABE fermentation as an example, the work further sheds light on systems biology toward an integrated and quantitative understanding of complex microbial physiology
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